#!/usr/bin/env bash # # Recursively evaluate every completed run under runs/. # # A directory is considered a runnable run when it contains both: # - train_config.json # - best_model.pt # # Each missing report is scheduled independently: # - evaluate_auc.py # -> df_auc_delphi2m_report.csv # - evaluate_auc_v2.py # -> df_auc_landmark_delphi2m_report.csv # # Existing non-empty reports are skipped. Each evaluation task uses one GPU. # Tasks on the same GPU run sequentially; different GPUs run in parallel. # # Examples: # bash evaluate_all_runs_linux.sh --gpus 0 # bash evaluate_all_runs_linux.sh --gpus 0,1,2,3 # bash evaluate_all_runs_linux.sh --gpus 0,1 --dry-run # set -uo pipefail SCRIPT_DIR="$(cd -- "$(dirname -- "${BASH_SOURCE[0]}")" && pwd)" cd "$SCRIPT_DIR" RUNS_ROOT="$SCRIPT_DIR/runs" LOG_ROOT="$SCRIPT_DIR/batch_logs/evaluate_all_runs" GPU_CSV="0" PYTHON_BIN="${PYTHON_BIN:-python}" NUM_WORKERS=4 NUM_WORKERS_AUC=4 DRY_RUN=0 TOKEN_REPORT="df_auc_delphi2m_report.csv" LANDMARK_REPORT="df_auc_landmark_delphi2m_report.csv" usage() { cat <<'EOF' Usage: bash evaluate_all_runs_linux.sh [options] Options: --gpus LIST Comma-separated GPU ids (default: 0). --runs-root PATH Root directory scanned recursively (default: ./runs). --log-root PATH Evaluation log root. --python PATH Python executable (default: $PYTHON_BIN or python). --num-workers N DataLoader workers per evaluation (default: 4). --num-workers-auc N CPU AUC workers per evaluation (default: 4). --dry-run Discover runs and print missing evaluations only. -h, --help Show this help message. Completion files: evaluate_auc.py df_auc_delphi2m_report.csv evaluate_auc_v2.py df_auc_landmark_delphi2m_report.csv Existing non-empty completion files are skipped independently. EOF } while (($# > 0)); do case "$1" in --gpus) [[ $# -ge 2 ]] || { echo "ERROR: --gpus requires a value." >&2 exit 2 } GPU_CSV="$2" shift 2 ;; --runs-root) [[ $# -ge 2 ]] || { echo "ERROR: --runs-root requires a value." >&2 exit 2 } RUNS_ROOT="$2" shift 2 ;; --log-root) [[ $# -ge 2 ]] || { echo "ERROR: --log-root requires a value." >&2 exit 2 } LOG_ROOT="$2" shift 2 ;; --python) [[ $# -ge 2 ]] || { echo "ERROR: --python requires a value." >&2 exit 2 } PYTHON_BIN="$2" shift 2 ;; --num-workers) [[ $# -ge 2 ]] || { echo "ERROR: --num-workers requires a value." >&2 exit 2 } NUM_WORKERS="$2" shift 2 ;; --num-workers-auc) [[ $# -ge 2 ]] || { echo "ERROR: --num-workers-auc requires a value." >&2 exit 2 } NUM_WORKERS_AUC="$2" shift 2 ;; --dry-run) DRY_RUN=1 shift ;; -h|--help) usage exit 0 ;; *) echo "ERROR: unknown argument: $1" >&2 usage >&2 exit 2 ;; esac done [[ -n "$GPU_CSV" ]] || { echo "ERROR: --gpus must not be empty." >&2 exit 2 } [[ "$NUM_WORKERS" =~ ^[0-9]+$ ]] || { echo "ERROR: --num-workers must be a non-negative integer." >&2 exit 2 } [[ "$NUM_WORKERS_AUC" =~ ^[1-9][0-9]*$ ]] || { echo "ERROR: --num-workers-auc must be a positive integer." >&2 exit 2 } [[ -d "$RUNS_ROOT" ]] || { echo "ERROR: runs root does not exist: $RUNS_ROOT" >&2 exit 2 } [[ -f "$SCRIPT_DIR/evaluate_auc.py" ]] || { echo "ERROR: missing evaluator: $SCRIPT_DIR/evaluate_auc.py" >&2 exit 2 } [[ -f "$SCRIPT_DIR/evaluate_auc_v2.py" ]] || { echo "ERROR: missing evaluator: $SCRIPT_DIR/evaluate_auc_v2.py" >&2 exit 2 } command -v "$PYTHON_BIN" >/dev/null 2>&1 || { echo "ERROR: Python executable not found: $PYTHON_BIN" >&2 exit 2 } RUNS_ROOT="$(cd -- "$RUNS_ROOT" && pwd)" if [[ "$LOG_ROOT" != /* ]]; then LOG_ROOT="$SCRIPT_DIR/$LOG_ROOT" fi IFS=',' read -r -a GPU_IDS <<< "$GPU_CSV" declare -A SEEN_GPUS=() for gpu in "${GPU_IDS[@]}"; do [[ -n "$gpu" && "$gpu" =~ ^[A-Za-z0-9._:-]+$ ]] || { echo "ERROR: invalid GPU id: $gpu" >&2 exit 2 } [[ -z "${SEEN_GPUS[$gpu]+x}" ]] || { echo "ERROR: duplicate GPU id: $gpu" >&2 exit 2 } SEEN_GPUS["$gpu"]=1 done declare -a JOB_RUN_DIRS=() declare -a JOB_EVALUATORS=() declare -a JOB_REPORTS=() declare -a JOB_LOG_FILES=() add_job() { local run_dir="$1" local evaluator="$2" local report_name="$3" local relative_run="${run_dir#"$RUNS_ROOT"/}" local evaluator_name="${evaluator%.py}" JOB_RUN_DIRS+=("$run_dir") JOB_EVALUATORS+=("$evaluator") JOB_REPORTS+=("$report_name") JOB_LOG_FILES+=("$LOG_ROOT/$relative_run/$evaluator_name.log") } run_count=0 incomplete_run_count=0 skipped_token_count=0 skipped_landmark_count=0 while IFS= read -r -d '' config_path; do run_dir="${config_path%/train_config.json}" ((run_count += 1)) if [[ ! -f "$run_dir/best_model.pt" ]]; then echo "[SKIP] Incomplete run without best_model.pt: $run_dir" ((incomplete_run_count += 1)) continue fi if [[ -s "$run_dir/$TOKEN_REPORT" ]]; then ((skipped_token_count += 1)) else add_job "$run_dir" "evaluate_auc.py" "$TOKEN_REPORT" fi if [[ -s "$run_dir/$LANDMARK_REPORT" ]]; then ((skipped_landmark_count += 1)) else add_job "$run_dir" "evaluate_auc_v2.py" "$LANDMARK_REPORT" fi done < <(find "$RUNS_ROOT" -type f -name "train_config.json" -print0) if ((!DRY_RUN)); then mkdir -p "$LOG_ROOT" fi print_command() { printf '%q ' "$@" printf '\n' } run_job() { local job_index="$1" local gpu="$2" local run_dir="${JOB_RUN_DIRS[$job_index]}" local evaluator="${JOB_EVALUATORS[$job_index]}" local report_name="${JOB_REPORTS[$job_index]}" local log_file="${JOB_LOG_FILES[$job_index]}" local -a command=( "$PYTHON_BIN" -u "$SCRIPT_DIR/$evaluator" --run_path "$run_dir" --output_path "$run_dir" --device cuda --num_workers "$NUM_WORKERS" --num_workers_auc "$NUM_WORKERS_AUC" ) echo "[$(date '+%F %T')] START evaluator=$evaluator gpu=$gpu" echo " run=$run_dir" echo " report=$report_name" if ((DRY_RUN)); then printf ' CUDA_VISIBLE_DEVICES=%q ' "$gpu" print_command "${command[@]}" return 0 fi mkdir -p "$(dirname -- "$log_file")" if CUDA_VISIBLE_DEVICES="$gpu" PYTHONUNBUFFERED=1 \ "${command[@]}" >"$log_file" 2>&1; then if [[ -s "$run_dir/$report_name" ]]; then echo "[$(date '+%F %T')] DONE evaluator=$evaluator gpu=$gpu" return 0 fi echo "[$(date '+%F %T')] FAIL evaluator=$evaluator gpu=$gpu" >&2 echo " Evaluator exited successfully but did not create: $run_dir/$report_name" >&2 echo " See: $log_file" >&2 return 1 else local exit_code=$? echo "[$(date '+%F %T')] FAIL evaluator=$evaluator gpu=$gpu exit=$exit_code" >&2 echo " See: $log_file" >&2 return "$exit_code" fi } worker() { local slot="$1" local gpu="${GPU_IDS[$slot]}" local job_index local failed=0 for ((job_index = slot; job_index < ${#JOB_RUN_DIRS[@]}; job_index += ${#GPU_IDS[@]})); do run_job "$job_index" "$gpu" || failed=1 done return "$failed" } echo "Runs root: $RUNS_ROOT" echo "GPUs: ${GPU_IDS[*]}" echo "Runs discovered: $run_count" echo "Incomplete runs skipped: $incomplete_run_count" echo "Existing token reports skipped: $skipped_token_count" echo "Existing landmark reports skipped: $skipped_landmark_count" echo "Missing evaluation tasks: ${#JOB_RUN_DIRS[@]}" echo "Log root: $LOG_ROOT" echo if ((${#JOB_RUN_DIRS[@]} == 0)); then echo "All discovered runs already have both AUC reports." exit 0 fi declare -a WORKER_PIDS=() for ((slot = 0; slot < ${#GPU_IDS[@]}; slot++)); do worker "$slot" & WORKER_PIDS+=("$!") done overall_status=0 for pid in "${WORKER_PIDS[@]}"; do wait "$pid" || overall_status=1 done if ((overall_status != 0)); then echo "One or more evaluation tasks failed. Inspect logs under: $LOG_ROOT" >&2 exit 1 fi if ((DRY_RUN)); then echo "Dry run completed successfully." else echo "All missing AUC evaluations completed successfully." fi