Files
DeepHealthExpo/train_next_step.py

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"""
Train DeepHealth with next-token / next-time-point supervision.
The next-step dataset uses observed event histories, including CHECKUP state
tokens, plus optional gap <NO_EVENT> imputation. UTS training reads out only
same-time group ends.
"""
from __future__ import annotations
import argparse
import json
import logging
import math
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import os
import time
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from pathlib import Path
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from typing import Any, Dict, Iterator, List
import numpy as np
import torch
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import torch.distributed as dist
import torch.nn as nn
from torch.nn.parallel import DistributedDataParallel
from torch.nn.utils import clip_grad_norm_
from torch.optim import AdamW
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from torch.utils.data import (
DataLoader,
DistributedSampler,
RandomSampler,
Sampler,
)
from tqdm.auto import tqdm
from dataset import HealthDataset, collate_fn
from losses import build_loss
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from models import DeepHealth
from readouts import build_readout
from targets import CHECKUP_IDX, NO_EVENT_IDX, PAD_IDX
from train_util import (
configure_torch_for_training,
create_unique_run_dir,
resolve_device,
save_checkpoint,
save_config,
set_optimizer_lr,
set_seed,
setup_logging,
split_dataset,
split_dataset_by_eid_files,
)
MODEL_INPUT_KEYS = (
"event_seq",
"time_seq",
"sex",
"padding_mask",
)
EXPOSURE_INPUT_KEYS = (
"exposure_daily",
"exposure_monthly",
)
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class ExposureLocalityBatchSampler(Sampler[List[int]]):
"""Randomized batches with within-buffer sorting by exposure parquet locality."""
def __init__(
self,
data_source,
batch_size: int,
buffer_size: int,
seed: int,
drop_last: bool = False,
) -> None:
self.data_source = data_source
self.batch_size = int(batch_size)
self.buffer_size = max(int(buffer_size), self.batch_size)
self.seed = int(seed)
self.drop_last = bool(drop_last)
self.epoch = 0
def __iter__(self) -> Iterator[List[int]]:
n = len(self.data_source)
generator = torch.Generator().manual_seed(self.seed + self.epoch)
self.epoch += 1
shuffled = torch.randperm(n, generator=generator).tolist()
for start in range(0, n, self.buffer_size):
buffer = shuffled[start:start + self.buffer_size]
buffer.sort(key=self._locality_key)
for batch_start in range(0, len(buffer), self.batch_size):
batch = buffer[batch_start:batch_start + self.batch_size]
if len(batch) < self.batch_size and self.drop_last:
continue
yield batch
def __len__(self) -> int:
n = len(self.data_source)
if self.drop_last:
return n // self.batch_size
return (n + self.batch_size - 1) // self.batch_size
def _locality_key(self, local_idx: int) -> tuple[int, int, int]:
dataset = self.data_source
raw_idx = int(local_idx)
if hasattr(dataset, "dataset") and hasattr(dataset, "indices"):
raw_idx = int(dataset.indices[local_idx])
dataset = dataset.dataset
sample = getattr(dataset, "samples", [])[raw_idx]
exposure_index = sample.get("exposure_index")
exposure_cache = getattr(dataset, "exposure_cache", None)
if exposure_index is None or exposure_cache is None:
return (2**31 - 1, 2**31 - 1, raw_idx)
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block_id, block_offset = exposure_cache.locality_key(exposure_index)
return (block_id, block_offset, raw_idx)
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class DistributedExposureLocalityBatchSampler(Sampler[List[int]]):
"""Shard samples across ranks, then batch each shard by exposure locality."""
def __init__(
self,
data_source,
batch_size: int,
buffer_size: int,
seed: int,
rank: int,
world_size: int,
) -> None:
self.data_source = data_source
self.batch_size = int(batch_size)
self.buffer_size = max(int(buffer_size), self.batch_size)
self.distributed_sampler = DistributedSampler(
data_source,
num_replicas=world_size,
rank=rank,
shuffle=True,
seed=seed,
drop_last=False,
)
self._key_sampler = ExposureLocalityBatchSampler(
data_source, batch_size, buffer_size, seed
)
def set_epoch(self, epoch: int) -> None:
self.distributed_sampler.set_epoch(epoch)
def __iter__(self) -> Iterator[List[int]]:
indices = list(self.distributed_sampler)
for start in range(0, len(indices), self.buffer_size):
buffer = indices[start:start + self.buffer_size]
buffer.sort(key=self._key_sampler._locality_key)
for batch_start in range(0, len(buffer), self.batch_size):
yield buffer[batch_start:batch_start + self.batch_size]
def __len__(self) -> int:
return math.ceil(len(self.distributed_sampler) / self.batch_size)
class NextStepTrainingModel(nn.Module):
"""Keep backbone, readout, and risk head inside the DDP forward boundary."""
def __init__(self, model: DeepHealth, readout: nn.Module, readout_name: str):
super().__init__()
self.model = model
self.readout = readout
self.readout_name = readout_name
def forward(
self,
event_seq: torch.Tensor,
time_seq: torch.Tensor,
sex: torch.Tensor,
padding_mask: torch.Tensor,
readout_mask: torch.Tensor | None = None,
exposure_daily: torch.Tensor | None = None,
exposure_monthly: torch.Tensor | None = None,
) -> tuple[torch.Tensor, torch.Tensor, torch.Tensor]:
hidden = self.model(
event_seq=event_seq,
time_seq=time_seq,
sex=sex,
padding_mask=padding_mask,
target_mode="next_token",
exposure_daily=exposure_daily,
exposure_monthly=exposure_monthly,
)
if not isinstance(hidden, torch.Tensor):
raise TypeError("DeepHealth forward must return a hidden-state tensor")
current_times = time_seq[:, :hidden.size(1)]
current_padding = padding_mask[:, :hidden.size(1)]
readout_out = self.readout(
hidden=hidden,
time_seq=current_times,
padding_mask=current_padding,
readout_mask=readout_mask
if self.readout_name == "same_time_group_end"
else None,
)
logits = self.model.calc_risk(readout_out.hidden)
return logits, current_times, readout_out.readout_mask
def parse_args() -> argparse.Namespace:
parser = argparse.ArgumentParser(
description="Train DeepHealth with next-token/point supervision")
parser.add_argument("--data_prefix", type=str, default="ukb")
parser.add_argument("--labels_file", type=str, default="labels.csv")
parser.add_argument("--seed", type=int, default=42)
parser.add_argument("--no_event_interval_years", type=float, default=5.0)
parser.add_argument("--include_no_event_in_uts_target", action="store_true")
parser.add_argument("--train_ratio", type=float, default=0.7)
parser.add_argument("--val_ratio", type=float, default=0.15)
parser.add_argument("--test_ratio", type=float, default=0.15)
parser.add_argument("--train_eid_file", type=str, default="ukb_train_eid.csv")
parser.add_argument("--val_eid_file", type=str, default="ukb_val_eid.csv")
parser.add_argument("--test_eid_file", type=str, default="ukb_test_eid.csv")
parser.add_argument("--n_embd", type=int, default=120)
parser.add_argument("--n_head", type=int, default=10)
parser.add_argument("--n_hist_layer", type=int, default=12)
parser.add_argument("--dropout", type=float, default=0.0)
parser.add_argument("--exposure_cache_dir", type=str, default=None)
parser.add_argument("--mask_onset_exposure", action="store_true")
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parser.add_argument(
"--d_model",
type=int,
default=64,
help="Internal TimesNet channel dimension for exposure encoding.",
)
parser.add_argument("--exposure_n_layers", type=int, default=2)
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parser.add_argument("--exposure_top_k", type=int, default=2)
parser.add_argument("--exposure_n_backbone_blocks", type=int, default=1)
parser.add_argument("--exposure_backbone_kernel_size", type=int, default=5)
parser.add_argument("--exposure_backbone_expansion", type=float, default=2.0)
parser.add_argument("--no_exposure_gate", action="store_true")
parser.add_argument("--target_mode", type=str, default="uts",
choices=["delphi2m", "uts"])
parser.add_argument("--readout_name", type=str, default=None,
choices=["token", "same_time_group_end", "last_valid"])
parser.add_argument("--readout_reduce", type=str, default="mean",
choices=["mean", "sum"])
parser.add_argument("--t_min", type=float, default=0.0027378507871321013)
parser.add_argument("--max_exp_input", type=float, default=60.0)
parser.add_argument("--ce_weight", type=float, default=1.0)
parser.add_argument("--time_weight", type=float, default=1.0)
parser.add_argument("--ignore_no_event_in_delphi2m", action="store_true")
parser.add_argument("--batch_size", type=int, default=128)
parser.add_argument("--base_lr", type=float, default=3e-4)
parser.add_argument("--weight_decay", type=float, default=0.1)
parser.add_argument("--betas", type=float, nargs=2, default=(0.9, 0.99))
parser.add_argument("--grad_clip", type=float, default=1.0)
parser.add_argument("--max_epochs", type=int, default=200)
parser.add_argument("--warmup_epochs", type=int, default=10)
parser.add_argument("--patience", type=int, default=15)
parser.add_argument("--min_lr_ratio", type=float, default=0.1)
parser.add_argument("--num_workers", type=int, default=4)
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parser.add_argument(
"--prefetch_factor",
type=int,
default=4,
help="DataLoader batches prefetched per worker when num_workers > 0.",
)
parser.add_argument(
"--exposure_locality_buffer_size",
type=int,
default=4096,
help=(
"Training-only shuffle buffer sorted by exposure parquet locality. "
"Set 0 to use the standard RandomSampler."
),
)
parser.add_argument("--device", type=str, default="cuda")
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parser.add_argument(
"--amp",
action=argparse.BooleanOptionalAction,
default=True,
help="Use CUDA automatic mixed precision.",
)
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parser.add_argument(
"--data_parallel",
action="store_true",
help="Use torch.nn.DataParallel across multiple CUDA devices.",
)
parser.add_argument(
"--gpu_ids",
type=str,
default=None,
help="Comma-separated CUDA device ids for --data_parallel, e.g. 0,1,2,3.",
)
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parser.add_argument(
"--ddp_backend",
default=None,
choices=["nccl", "gloo"],
help="DDP backend. Defaults to nccl for torchrun multi-GPU training.",
)
parser.add_argument("--progress_interval", type=int, default=20)
args = parser.parse_args()
use_eid_split = all(
getattr(args, name)
for name in ("train_eid_file", "val_eid_file", "test_eid_file")
)
if not use_eid_split and not np.isclose(args.train_ratio + args.val_ratio + args.test_ratio, 1.0):
raise ValueError("train_ratio + val_ratio + test_ratio must equal 1.0")
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if args.num_workers > 0 and args.prefetch_factor <= 0:
raise ValueError("prefetch_factor must be positive when num_workers > 0")
if args.exposure_locality_buffer_size < 0:
raise ValueError("exposure_locality_buffer_size must be non-negative")
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if args.d_model <= 0:
raise ValueError("--d_model must be positive")
if args.target_mode == "uts":
args.readout_name = args.readout_name or "same_time_group_end"
args.include_no_event_in_uts_target = True
else:
args.readout_name = args.readout_name or "token"
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if args.gpu_ids:
try:
args.gpu_ids = [int(part.strip()) for part in args.gpu_ids.split(",") if part.strip()]
except ValueError as exc:
raise ValueError("--gpu_ids must be a comma-separated list of integers") from exc
if not args.gpu_ids:
raise ValueError("--gpu_ids did not contain any valid CUDA device ids")
args.data_parallel = True
return args
def get_lr(epoch: int, args: argparse.Namespace, adaptive_lr: float) -> float:
if epoch < args.warmup_epochs:
return adaptive_lr * (epoch + 1) / args.warmup_epochs
progress = (epoch - args.warmup_epochs) / max(1, args.max_epochs - args.warmup_epochs)
cosine = 0.5 * (1 + math.cos(math.pi * progress))
return adaptive_lr * (args.min_lr_ratio + cosine * (1 - args.min_lr_ratio))
def move_batch_to_device(batch: Dict[str, torch.Tensor], device: torch.device) -> Dict[str, torch.Tensor]:
non_blocking = device.type == "cuda"
return {
key: value.to(device, non_blocking=non_blocking)
if isinstance(value, torch.Tensor)
else value
for key, value in batch.items()
}
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def _cuda_device_index(device: torch.device) -> int:
if device.type != "cuda":
raise ValueError("CUDA device is required for multi-GPU training")
if device.index is not None:
return int(device.index)
current = torch.cuda.current_device()
return int(current)
def unwrap_model(model):
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if isinstance(model, (torch.nn.DataParallel, DistributedDataParallel)):
return model.module
return model
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def maybe_wrap_data_parallel(
model: DeepHealth,
args: argparse.Namespace,
device: torch.device,
logger: logging.Logger,
):
if not args.data_parallel:
return model
if device.type != "cuda":
raise ValueError("--data_parallel requires --device cuda or cuda:<id>")
if not torch.cuda.is_available() or torch.cuda.device_count() < 2:
raise ValueError("--data_parallel requires at least two CUDA devices")
primary = _cuda_device_index(device)
device_ids = args.gpu_ids if args.gpu_ids else list(range(torch.cuda.device_count()))
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device_ids = [primary, *[idx for idx in device_ids if idx != primary]]
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if len(device_ids) < 2:
raise ValueError("--data_parallel needs at least two device ids")
logger.info(f"Using DataParallel on CUDA devices: {device_ids}")
return torch.nn.DataParallel(model, device_ids=device_ids, output_device=primary)
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def init_distributed(
args: argparse.Namespace,
) -> tuple[torch.device, int, int, int]:
world_size = int(os.environ.get("WORLD_SIZE", "1"))
if world_size == 1:
return resolve_device(args.device), 0, 0, 1
if args.data_parallel:
raise ValueError("--data_parallel cannot be combined with torchrun/DDP")
if not torch.cuda.is_available():
raise ValueError("Multi-process next-step training requires CUDA")
rank = int(os.environ["RANK"])
local_rank = int(os.environ["LOCAL_RANK"])
torch.cuda.set_device(local_rank)
dist.init_process_group(
backend=args.ddp_backend or "nccl",
init_method="env://",
)
return torch.device("cuda", local_rank), rank, local_rank, world_size
def distributed_run_dir(
args: argparse.Namespace, rank: int, world_size: int
) -> tuple[Path, str]:
payload: list[str | None] = [None, None]
if rank == 0:
run_dir, run_name = create_unique_run_dir(
lambda timestamp: (
f"absolute_exponential_next_token_{args.target_mode}_"
f"gap_{args.no_event_interval_years:g}y_"
f"{'exposure' if args.exposure_cache_dir else 'noexposure'}_"
f"{timestamp}"
)
)
payload = [str(run_dir), run_name]
if world_size > 1:
dist.broadcast_object_list(payload, src=0)
return Path(str(payload[0])), str(payload[1])
def rank_logger(rank: int, run_dir: Path) -> logging.Logger:
if rank == 0:
return setup_logging(run_dir)
logger = logging.getLogger(f"DeepHealth.rank{rank}")
logger.handlers.clear()
logger.addHandler(logging.NullHandler())
return logger
def build_model(args: argparse.Namespace, dataset: HealthDataset) -> DeepHealth:
return DeepHealth(
vocab_size=dataset.vocab_size,
n_embd=args.n_embd,
n_head=args.n_head,
n_hist_layer=args.n_hist_layer,
target_mode="next_token",
dist_mode="exponential",
dropout=args.dropout,
use_exposure_encoder=args.exposure_cache_dir is not None,
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exposure_d_model=args.d_model,
exposure_n_layers=args.exposure_n_layers,
exposure_top_k=args.exposure_top_k,
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exposure_n_backbone_blocks=args.exposure_n_backbone_blocks,
exposure_backbone_kernel_size=args.exposure_backbone_kernel_size,
exposure_backbone_expansion=args.exposure_backbone_expansion,
exposure_use_gate=not args.no_exposure_gate,
)
def build_next_step_readout(args: argparse.Namespace):
if args.readout_name == "same_time_group_end":
return build_readout("same_time_group_end", reduce=args.readout_reduce)
return build_readout(args.readout_name)
def build_next_step_loss(args: argparse.Namespace):
if args.target_mode == "delphi2m":
ignored_tokens = {PAD_IDX, CHECKUP_IDX}
if args.ignore_no_event_in_delphi2m:
ignored_tokens.add(NO_EVENT_IDX)
return build_loss(
"delphi2m",
ignored_tokens=ignored_tokens,
t_min=args.t_min,
max_exp_input=args.max_exp_input,
ce_weight=args.ce_weight,
time_weight=args.time_weight,
)
return build_loss(
"uts",
ignored_idx={PAD_IDX, CHECKUP_IDX},
t_min=args.t_min,
max_exp_input=args.max_exp_input,
)
def compute_next_step_loss(
args: argparse.Namespace,
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model,
criterion,
batch: Dict[str, torch.Tensor],
device: torch.device,
) -> tuple[torch.Tensor, Dict[str, torch.Tensor]]:
batch_cpu = batch
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input_keys = [*MODEL_INPUT_KEYS, "readout_mask"]
input_keys.extend(key for key in EXPOSURE_INPUT_KEYS if key in batch_cpu)
batch = move_batch_to_device(
{key: batch_cpu[key] for key in input_keys},
device,
)
model_kwargs = {
"event_seq": batch["event_seq"],
"time_seq": batch["time_seq"],
"sex": batch["sex"],
"padding_mask": batch["padding_mask"],
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"readout_mask": batch["readout_mask"],
}
if "exposure_daily" in batch:
model_kwargs["exposure_daily"] = batch["exposure_daily"]
model_kwargs["exposure_monthly"] = batch["exposure_monthly"]
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logits, current_times, output_readout_mask = model(**model_kwargs)
non_blocking = device.type == "cuda"
targets = {
"target_event_seq": batch_cpu["target_event_seq"].to(
device, non_blocking=non_blocking
),
"target_time_seq": batch_cpu["target_time_seq"].to(
device, non_blocking=non_blocking
),
}
if args.target_mode == "uts":
targets["target_dt_unique"] = batch_cpu["target_dt_unique"].to(
device, non_blocking=non_blocking
)
targets["target_multi_hot"] = batch_cpu["target_multi_hot"].to(
device, non_blocking=non_blocking
)
if args.target_mode == "delphi2m":
loss, parts = criterion(
logits=logits,
target_events=targets["target_event_seq"],
target_times=targets["target_time_seq"],
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current_times=current_times,
padding_mask=output_readout_mask,
return_components=True,
)
else:
loss, parts = criterion(
logits=logits,
target_multi_hot=targets["target_multi_hot"],
target_dt_unique=targets["target_dt_unique"],
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readout_mask=output_readout_mask,
return_components=True,
)
return loss, parts
def run_epoch(
logger: logging.Logger,
args: argparse.Namespace,
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model,
criterion,
loader: DataLoader,
optimizer: AdamW | None,
device: torch.device,
is_train: bool,
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rank: int,
scaler: torch.amp.GradScaler,
amp_enabled: bool,
) -> float:
model.train(is_train)
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totals = torch.zeros(3, device=device, dtype=torch.float64)
parts_sum: Dict[str, torch.Tensor] = {}
desc = "train" if is_train else "val"
progress_interval = max(1, int(args.progress_interval))
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progress = tqdm(
loader, desc=desc, leave=False, dynamic_ncols=True, disable=rank != 0
)
for batch_idx, batch in enumerate(progress):
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with torch.autocast(
device_type=device.type,
dtype=torch.float16,
enabled=amp_enabled,
):
loss, parts = compute_next_step_loss(
args, model, criterion, batch, device
)
finite = torch.isfinite(loss).to(dtype=torch.int32)
if dist.is_initialized():
dist.all_reduce(finite, op=dist.ReduceOp.MIN)
if not bool(finite.item()):
totals[2] += 1
continue
if is_train:
if optimizer is None:
raise ValueError("optimizer is required for training")
optimizer.zero_grad(set_to_none=True)
scaler.scale(loss).backward()
scaler.unscale_(optimizer)
if args.grad_clip > 0:
clip_grad_norm_(model.parameters(), args.grad_clip)
scaler.step(optimizer)
scaler.update()
totals[0] += loss.detach().double()
totals[1] += 1
for name, value in parts.items():
parts_sum[name] = (
parts_sum.get(name, torch.zeros((), device=device))
+ value.detach()
)
if rank == 0 and (batch_idx + 1) % progress_interval == 0:
progress.set_postfix(
loss=f"{loss.detach().item():.4f}",
avg=f"{(totals[0] / totals[1].clamp_min(1)).item():.4f}",
skipped=int(totals[2].item()),
)
if dist.is_initialized():
dist.all_reduce(totals, op=dist.ReduceOp.SUM)
skipped = int(totals[2].item())
if skipped:
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logger.info(f"Skipped {skipped} rank-batches due to non-finite loss")
if totals[1].item() == 0:
return float("inf")
return float((totals[0] / totals[1]).item())
def build_metadata(
args: argparse.Namespace,
dataset: HealthDataset,
run_name: str,
train_subset,
val_subset,
test_subset,
) -> Dict[str, Any]:
return {
"run_name": run_name,
"dataset_class": "NextStepHealthDataset",
"collate_fn": "next_step_collate_fn",
"model_class": "DeepHealth",
"model_target_mode": "next_token",
"target_mode": args.target_mode,
"dist_mode": "exponential",
"dataset_metadata": {
"vocab_size": int(dataset.vocab_size),
},
"use_exposure_encoder": args.exposure_cache_dir is not None,
"exposure_cache_dir": args.exposure_cache_dir,
"mask_onset_exposure": bool(args.mask_onset_exposure),
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"d_model": int(args.d_model),
"exposure_n_layers": int(args.exposure_n_layers),
"exposure_top_k": int(args.exposure_top_k),
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"exposure_n_backbone_blocks": int(args.exposure_n_backbone_blocks),
"exposure_backbone_kernel_size": int(args.exposure_backbone_kernel_size),
"exposure_backbone_expansion": float(args.exposure_backbone_expansion),
"exposure_use_gate": not bool(args.no_exposure_gate),
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"num_workers": int(args.num_workers),
"prefetch_factor": int(args.prefetch_factor),
"exposure_locality_buffer_size": int(args.exposure_locality_buffer_size),
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"data_parallel": bool(args.data_parallel),
"gpu_ids": args.gpu_ids,
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"ddp_world_size": int(os.environ.get("WORLD_SIZE", "1")),
"split_sizes": {
"train": int(len(train_subset)),
"val": int(len(val_subset)),
"test": int(len(test_subset)),
},
"resolved_readout_name": args.readout_name,
"resolved_loss_name": args.target_mode,
}
def main() -> None:
args = parse_args()
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device, rank, local_rank, world_size = init_distributed(args)
set_seed(args.seed + rank)
configure_torch_for_training(device)
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run_dir, run_name = distributed_run_dir(args, rank, world_size)
logger = rank_logger(rank, run_dir)
logger.info(f"Starting next-step training run: {run_name}")
logger.info(f"Device: {device}")
logger.info(f"readout={args.readout_name}, target_mode={args.target_mode}")
logger.info(f"exposure_cache_dir={args.exposure_cache_dir}")
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logger.info(
"DataLoader IO: "
f"num_workers={args.num_workers}, "
f"prefetch_factor={args.prefetch_factor if args.num_workers > 0 else None}, "
f"exposure_locality_buffer_size={args.exposure_locality_buffer_size}"
)
dataset = HealthDataset(
data_prefix=args.data_prefix,
labels_file=args.labels_file,
no_event_interval_years=args.no_event_interval_years,
include_no_event_in_uts_target=args.include_no_event_in_uts_target,
exposure_cache_dir=args.exposure_cache_dir,
mask_onset_exposure=args.mask_onset_exposure,
)
if args.train_eid_file and args.val_eid_file and args.test_eid_file:
train_subset, val_subset, test_subset = split_dataset_by_eid_files(
dataset=dataset,
train_eid_file=args.train_eid_file,
val_eid_file=args.val_eid_file,
test_eid_file=args.test_eid_file,
)
logger.info(
"Using eid split files: "
f"train={args.train_eid_file}, val={args.val_eid_file}, test={args.test_eid_file}"
)
else:
train_subset, val_subset, test_subset = split_dataset(
dataset=dataset,
train_ratio=args.train_ratio,
val_ratio=args.val_ratio,
test_ratio=args.test_ratio,
seed=args.seed,
)
logger.info(
f"Using random ratio split: train={args.train_ratio}, "
f"val={args.val_ratio}, test={args.test_ratio}, seed={args.seed}"
)
logger.info(
f"Samples: train={len(train_subset)}, val={len(val_subset)}, test={len(test_subset)}"
)
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if args.batch_size % world_size != 0:
raise ValueError(
f"--batch_size={args.batch_size} must be divisible by "
f"DDP world size {world_size}"
)
local_batch_size = args.batch_size // world_size
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dataloader_kwargs = {
"collate_fn": collate_fn,
"num_workers": args.num_workers,
"pin_memory": device.type == "cuda",
"persistent_workers": args.num_workers > 0,
"prefetch_factor": args.prefetch_factor if args.num_workers > 0 else None,
}
use_locality_sampler = (
args.exposure_cache_dir is not None
and args.exposure_locality_buffer_size > 0
)
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if use_locality_sampler:
logger.info("Using exposure-locality batch sampler for training")
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if world_size > 1:
train_batch_sampler = DistributedExposureLocalityBatchSampler(
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train_subset,
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batch_size=local_batch_size,
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buffer_size=args.exposure_locality_buffer_size,
seed=args.seed,
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rank=rank,
world_size=world_size,
)
else:
train_batch_sampler = ExposureLocalityBatchSampler(
train_subset,
batch_size=local_batch_size,
buffer_size=args.exposure_locality_buffer_size,
seed=args.seed,
)
train_loader = DataLoader(
train_subset,
batch_sampler=train_batch_sampler,
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**dataloader_kwargs,
)
else:
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train_sampler = (
DistributedSampler(
train_subset,
num_replicas=world_size,
rank=rank,
shuffle=True,
seed=args.seed,
)
if world_size > 1
else RandomSampler(
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train_subset,
generator=torch.Generator().manual_seed(args.seed),
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)
)
train_loader = DataLoader(
train_subset,
batch_size=local_batch_size,
sampler=train_sampler,
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**dataloader_kwargs,
)
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val_sampler = (
DistributedSampler(
val_subset, num_replicas=world_size, rank=rank, shuffle=False
)
if world_size > 1 else None
)
test_sampler = (
DistributedSampler(
test_subset, num_replicas=world_size, rank=rank, shuffle=False
)
if world_size > 1 else None
)
val_loader = DataLoader(
val_subset,
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batch_size=local_batch_size,
sampler=val_sampler,
shuffle=False,
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**dataloader_kwargs,
)
test_loader = DataLoader(
test_subset,
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batch_size=local_batch_size,
sampler=test_sampler,
shuffle=False,
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**dataloader_kwargs,
)
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backbone = build_model(args, dataset)
readout = build_next_step_readout(args).to(device)
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model = NextStepTrainingModel(
backbone, readout, args.readout_name
).to(device)
if world_size > 1:
model = DistributedDataParallel(
model, device_ids=[local_rank], output_device=local_rank
)
logger.info(
f"Using DDP with {world_size} processes; "
f"global_batch={args.batch_size}, per_gpu_batch={local_batch_size}"
)
else:
model = maybe_wrap_data_parallel(model, args, device, logger)
criterion = build_next_step_loss(args)
optimizer = AdamW(
model.parameters(),
lr=args.base_lr,
betas=tuple(args.betas),
weight_decay=args.weight_decay,
)
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amp_enabled = bool(args.amp and device.type == "cuda")
scaler = torch.amp.GradScaler("cuda", enabled=amp_enabled)
adaptive_lr = args.base_lr * math.sqrt(args.batch_size / 128)
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if rank == 0:
save_config(
args,
run_dir / "train_config.json",
extra=build_metadata(
args, dataset, run_name, train_subset, val_subset, test_subset
),
)
best_val = float("inf")
patience = 0
history = []
best_model_path = run_dir / "best_model.pt"
start = time.time()
for epoch in range(args.max_epochs):
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if hasattr(train_loader.batch_sampler, "set_epoch"):
train_loader.batch_sampler.set_epoch(epoch)
elif hasattr(train_loader.sampler, "set_epoch"):
train_loader.sampler.set_epoch(epoch)
lr = get_lr(epoch, args, adaptive_lr)
set_optimizer_lr(optimizer, lr)
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train_loss = run_epoch(
logger, args, model, criterion, train_loader, optimizer,
device, True, rank, scaler, amp_enabled,
)
with torch.no_grad():
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val_loss = run_epoch(
logger, args, model, criterion, val_loader, None,
device, False, rank, scaler, amp_enabled,
)
is_best = val_loss < best_val
if is_best:
best_val = val_loss
patience = 0
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if rank == 0:
save_checkpoint(unwrap_model(model).model, best_model_path)
else:
patience += 1
logger.info(
f"Epoch {epoch + 1}/{args.max_epochs} | lr={lr:.6f} | "
f"train_loss={train_loss:.6f} | val_loss={val_loss:.6f} | "
f"best_val_loss={best_val:.6f} | patience={patience}/{args.patience} | "
f"elapsed={time.time() - start:.1f}s"
)
history.append({
"epoch": epoch + 1,
"lr": lr,
"train_loss": train_loss,
"val_loss": val_loss,
"best_val_loss": best_val,
"is_best": int(is_best),
})
if patience >= args.patience:
logger.info(f"Early stopping triggered at epoch {epoch + 1}")
break
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if rank == 0:
with (run_dir / "history.json").open("w", encoding="utf-8") as f:
json.dump(history, f, indent=2)
logger.info("Evaluating best model on next-step test split...")
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if world_size > 1:
dist.barrier()
unwrap_model(model).model.load_state_dict(
torch.load(best_model_path, map_location=device)
)
with torch.no_grad():
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test_loss = run_epoch(
logger, args, model, criterion, test_loader, None,
device, False, rank, scaler, amp_enabled,
)
logger.info(f"Test loss: {test_loss:.6f}")
logger.info(f"Best checkpoint: {best_model_path}")
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if dist.is_initialized():
dist.destroy_process_group()
if __name__ == "__main__":
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try:
main()
finally:
if dist.is_initialized():
dist.destroy_process_group()