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SpectraREML/include/spectra_reml/fixed_effects.hpp

28 lines
963 B
C++

#pragma once
#include "spectra_reml/types.hpp"
#include <vector>
namespace spectra::reml {
struct FixedEffectHypothesis {
// Rows are restrictions and columns correspond to beta in design order.
ColMajorMatrix contrast;
// Empty means a zero right-hand side.
std::vector<double> rhs;
};
// Computes coefficient-wise tests and any supplied general linear hypotheses
// at an already fitted REML solution. Inputs must use the same (possibly GRM-
// rotated) coordinate system and phenotype scale as the supplied fit.
[[nodiscard]] FixedEffectInferenceResult infer_fixed_effects_spectral(
const std::vector<double>& y_star, const ColMajorMatrix& x_star,
const std::vector<double>& eigenvalues, const RemlResult& fit,
FixedEffectTestMethod method,
const std::vector<FixedEffectHypothesis>& hypotheses = {},
double rank_tolerance_relative = 1e-10,
double covariance_floor_relative = 1e-12);
} // namespace spectra::reml